MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Muribacter muris
19428wC3_WT12
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 94
bases: 2,526,693 bps
CDS: 2,443
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 49
misc RNA:
Total features: 2,502
Total number of protein coding genes annotated/found:
2,443
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5037|JADGLC010000001.1
SEQF5037_00829
Genome Viewer
NA
AA
1230/410
170944-169715
Serine transporter
SEQF5037|JADGLC010000001.1
SEQF5037_00828
Genome Viewer
NA
AA
1380/460
169618-168239
L-serine dehydratase 1
SEQF5037|JADGLC010000002.1
SEQF5037_01458
Genome Viewer
NA
AA
1191/397
168429-169619
Cysteine desulfurase CsdA
SEQF5037|JADGLC010000001.1
SEQF5037_00827
Genome Viewer
NA
AA
756/252
168199-167444
Inner membrane transport permease YadH
SEQF5037|JADGLC010000002.1
SEQF5037_01457
Genome Viewer
NA
AA
684/228
167749-168432
hypothetical protein
SEQF5037|JADGLC010000002.1
SEQF5037_01456
Genome Viewer
NA
AA
1248/416
167619-166372
hypothetical protein
SEQF5037|JADGLC010000001.1
SEQF5037_00826
Genome Viewer
NA
AA
756/252
166407-167162
NADP-dependent 3-hydroxy acid dehydrogenase YdfG
SEQF5037|JADGLC010000001.1
SEQF5037_00825
Genome Viewer
NA
AA
162/54
166231-166392
hypothetical protein
SEQF5037|JADGLC010000002.1
SEQF5037_01455
Genome Viewer
NA
AA
378/126
166196-165819
30S ribosomal protein S6
SEQF5037|JADGLC010000002.1
SEQF5037_01454
Genome Viewer
NA
AA
327/109
165832-165506
Primosomal replication protein N
SEQF5037|JADGLC010000001.1
SEQF5037_00824
Genome Viewer
NA
AA
600/200
165545-166144
hypothetical protein
SEQF5037|JADGLC010000002.1
SEQF5037_01453
Genome Viewer
NA
AA
228/76
165494-165267
30S ribosomal protein S18
SEQF5037|JADGLC010000001.1
SEQF5037_00823
Genome Viewer
NA
AA
1446/482
165333-163888
Catalase
SEQF5037|JADGLC010000002.1
SEQF5037_01452
Genome Viewer
NA
AA
450/150
165251-164802
50S ribosomal protein L9
SEQF5037|JADGLC010000002.1
SEQF5037_01451
Genome Viewer
NA
AA
216/72
164530-164745
hypothetical protein
SEQF5037|JADGLC010000002.1
SEQF5037_01450
Genome Viewer
NA
AA
729/243
164350-163622
hypothetical protein
SEQF5037|JADGLC010000001.1
SEQF5037_00822
Genome Viewer
NA
AA
1101/367
163704-162604
hypothetical protein
SEQF5037|JADGLC010000002.1
SEQF5037_01449
Genome Viewer
NA
AA
942/314
163618-162677
HTH-type transcriptional regulator TreR
SEQF5037|JADGLC010000002.1
SEQF5037_01448
Genome Viewer
NA
AA
819/273
162654-161836
Pyridoxal phosphate phosphatase YigL
SEQF5037|JADGLC010000001.1
SEQF5037_00821
Genome Viewer
NA
AA
474/158
162000-162473
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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